DML

Data Science

Multimedia

Bioinformatics

Brain

Projects

A background model for Hi-C data

Hi-C is a method for capturing contacts between all pairs of DNA fragments in one experim... Read more

Using spatial information of cells in profiling microscopic ...

Single-cell imaging is a new technology that provides us information such as location, app... Read more

Hi-C interactions enrich for promoter interacting regions

We have assessed this study to identify the elements that the promoters tend to interact w... Read more

Identifying cancer-related genes via network feature learnin...

The primary purpose of this project is to identify cancer-related genes using PPI networks... Read more

CircWalk: Predicting CircRNA-Disease Associations using Grap...

Increasing evidence from novel research demonstrates that circRNAs play a role in the onse... Read more

Prediction of protein-compound interactions (CPI) using stru...

The numerical value of interaction in a protein-compound pair determines the tendency of a... Read more

Heterogeneous Knowledge Graph-Based Drug Repurposing Using G...

Novel drug discovery and development has extremely high costs and slow pace, which makes d... Read more

Compound-Protein Interaction Prediction

Compound-protein interaction (CPI) prediction, which determines the binding affinity of th... Read more

Medical image segmentation with limited annotated data using...

During the past few years, self-supervised contrastive learning has emerged as a paradigm ... Read more

A study in genome editing with clustered regularly interspac...

Clustered Regularly Interspaced Short Palindromic Repeats, or in short, CRISPR is a relati... Read more

Mutational Network Analysis

In this project network of co-mutations in breast cancer has been analyzed. By finding co... Read more

Pan-cancer integrative analysis of whole-genome De novo soma...

The advent of high throughput sequencing has enabled researchers to systematically evaluat... Read more

Whole-Genome Analysis of De Novo Somatic Point Mutations Rev...

Many studies have identified cancer subtypes based on the cancer driver genes, or the pro... Read more

Integrative analysis of mutated genes and mutational process...

Colorectal cancer (CRC) is one of the leading causes of cancer-related deaths in the world... Read more

Real-time automatic detection and classification of colorect...

Lately, the ASGE1 has addressed the resect and discard strategy known as PIVI2, determini... Read more

Deep Learning in a Structured Output Space

A large number of machine learning problems are considered as structured output problems i... Read more

Interpretable Training of Deep Networks

Despite the recent advances of deep neural networks and achieving state-of-the-art perfor-... Read more

Somatic point mutations are enriched in non-coding RNAs with...

Non-coding RNAs (ncRNAs) form a large portion of the mammalian genome. However, their biol... Read more

LAP: An Attention-Based Module for Faithful Interpretation a...

Despite the state-of-the-art performance of deep convolutional neural networks, they are s... Read more

Domain adaptation in digital mammography image processing

Breast cancer can be screened, diagnosed, and managed earlier with digital mammograms. Dat... Read more

Semi-Supervised Mammography-Screening Tumor Detection

Novel Biomarker Identification Through the Integration of Ge...

In recent years, the rapid development of high-throughput technologies has led to many typ... Read more

Members

Ph.D Student

Rassa Ghavami

Ph.D Alumni

Zahra Rahaie

M.Sc Alumni

Ali Rasekh

Erfan Mahmoudinia

Fatemeh Hashemi Golpaygani

Mahshid Sadat Khatami

Sabere Faez

Ali Saberi

Sanaz Gheiby

Zahra Shayegh

Zohreh Baharvand Irannia

Mohsen Hajiloo

Monireh Safari

Amir Pourmand

Ali Gharizadeh

Former Research Assistant

Amirreza Mozayani

Mohsen Naghipourfar

Amir Mohseni

Mehrab Hamidi

Masroor Bayati

Misagh Bagherian

Hamed Dashti

Morteza Kouhsar

Mohammad Rostami

B.Sc Alumni

Heliane Ziaei-Jam

Narges Rezaie

Kimia Hamidieh

Zahra Fazel

Ahmad Salimi

Esra Kashaninia

Amirreza Kazemi

Hamidreza Kamkari

Alireza Tajmirriahi

Solale Mohammadi

Group Manager

Amin Ghareyazi

Postdoctoral

Karim Abbasi

M.Sc Student

Mahsa Yazdani

Taha Mohammadzade

Abolfazl Malekahmadi

Saeide Danaei

Mehran Advand

Research Assistant

Dadbeh Tavanaei

B.Sc Student

Mohammadreza Salehi

Amirhossein Bagheri